mgkit.workflow.nuc2aa module

Translate nucleotidic sequence in amino acidic sequences

mgkit.workflow.nuc2aa.load_trans_table(table_name)

Loads translation table

mgkit.workflow.nuc2aa.main()

Main function

mgkit.workflow.nuc2aa.set_parser()

argument parser configuration

mgkit.workflow.nuc2aa.translate_buff(jobs, buff_seqs, trans_table)

Process a set amount of sequences - multiprocess

mgkit.workflow.nuc2aa.translate_seq(name, seq, trans_table)

Tranlate sequence into the 6 frames